Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900738.1_cds_XP_016450775.1_45192
CDS Infomation

[gene=LOC107775541] [db_xref=GeneID:107775541] [protein=scarecrow-like protein 18] [protein_id=XP_016450775.1] [location=5176..6795] [gbkey=CDS]
Sequence

ATGGAACCAGCCCAAGAAATCAGTTGGTTTTCCACTGGCATTGTATTGAATCAAGAAGAT
GAACAAGACATAACAAGTAAGAAATTACTTCCTTCTGATTCAGATTTTGATACAGTTGAT
GATTGGGATTTCGACGTCGAAAACGAAACAAAAAATCATCTTTATGTCACACCTGAGAGT
TTAATACATAACAAGAAGTCAAGAACTTCGTCGATTTCTTCACTTAACATATTGAAAGAC
TTTGGAAATGGATTCAGAAAATTAAAGGGGCAAAAAATCACTATTCAAACTAGTGAAATT
GAATGTGCAAATAATGGTAAATTGTCTACAGATTCAATTCTTCGTTTAGGCGGACAAAAT
TTTATTCAATCTTTTGAATCTTCAGTTGATCATCCATTTGTTAGTTCCTTGTTAAGTATT
TCAGAGGAAGATTCTAGAAGTGTTGAACTCGTCGAATGCCTTTTATTTTGCGCGGAGAAA
GTGTGGCAAAAGCAATATGATCGCGCGATTAACCTTTTAAATGAATGTGACAAGTTTAGT
TCCAAAACAGGAAATCCTGTTCAAAGACTTGTTTACTATTTTTCCCGTGCCCTACGTGAA
CGAGTTGATAAAGAAATCGGAAAAAATAGCACGAAAGGTTTGGAGATATATGGAATGCAA
GATCTTGAGAACGCGTTAAGGAGTATAAATCAATGTACGATTGCAGTTCAAGACATGCCT
CTTTGTCAAGTGATAAAATTTGTTGGAATTCAAGCGATAGTAGAAAATGTAAGAAACTCG
AAAAAGATTCATATAATTGATCTTGAAATTAAAATGGGGGTACAATGGACAATCTTGATA
CAAGCACTTGTAACTCATCAACAAGAATCTCAATCTCCCTTTGAATATCTCAAAATAACT
GCTATAGGAAATACTCAATCAAGGACTAAACTCGAGGAGACAGGTAAACGACTGATGAGT
TTTGCTGAGTCTTTAAACTTACTATTTTATTTCAAGAGCGTTATAATAGAAGATATCATG
GATCTCAAGAAAAATGACCTAGATATAGATCCTGAGGAAACGATTGCAGTTTACGCGCAA
CATTTTCTGGCTAACATGATAATGCAACAAGAAAAGCTTGATTTCTTGATGGGATTTATT
AAAGGTATAAATCAGCGTATAATGGTCATTGCTGAAGTTGAGGCAAATCATAATTCTCCA
GTTTTTGTTAACCGTTTTATTGAAGCATTATTCTACCACGGTGCTTTCTTCGATTTATTT
GAAGATTGTATGAAAAATAATGAATCAAACAGAACGACTATGGAATCAGAGTTTATGTGG
CAAGGAATAAGGAATATTGTAGCAGCTGAAGGAGAGGAAAGGACTATTAGACATGTAACA
ATTGAATTATGGAGAGAGTATTTTAAGCGATTTGGAATGGAGGAAATGAAATTGAGTAAT
TCGTCGTCGTATCAAGCGAAAATGCTGCTCGAAAAATTCAGTACTCGGAATTCTTTTACG
CTTGAAATGAATGGAAATTTTCTAGTTATTGGGTGGAAGGAAACTCCTCTGAATACACTT
TCTGCTTGGAAATTTCGTAAAAGAAGTATTTCTCATGGTGCTTGCTTCTTCACTCTTTAA

Peptide Sequence

PEP ID

XP_016450775.1
PEP Infomation

PREDICTED: scarecrow-like protein 18 [Nicotiana tabacum]
Sequence

MEPAQEISWFSTGIVLNQEDEQDITSKKLLPSDSDFDTVDDWDFDVENETKNHLYVTPES
LIHNKKSRTSSISSLNILKDFGNGFRKLKGQKITIQTSEIECANNGKLSTDSILRLGGQN
FIQSFESSVDHPFVSSLLSISEEDSRSVELVECLLFCAEKVWQKQYDRAINLLNECDKFS
SKTGNPVQRLVYYFSRALRERVDKEIGKNSTKGLEIYGMQDLENALRSINQCTIAVQDMP
LCQVIKFVGIQAIVENVRNSKKIHIIDLEIKMGVQWTILIQALVTHQQESQSPFEYLKIT
AIGNTQSRTKLEETGKRLMSFAESLNLLFYFKSVIIEDIMDLKKNDLDIDPEETIAVYAQ
HFLANMIMQQEKLDFLMGFIKGINQRIMVIAEVEANHNSPVFVNRFIEALFYHGAFFDLF
EDCMKNNESNRTTMESEFMWQGIRNIVAAEGEERTIRHVTIELWREYFKRFGMEEMKLSN
SSSYQAKMLLEKFSTRNSFTLEMNGNFLVIGWKETPLNTLSAWKFRKRSISHGACFFTL

Transcript Sequence

Gene sequence data has not been registered.